‘evolution’ directory
Cookbook of code for common selection & order statistics scenarios in economics, psychology, decision theory, drug development etc.
See Also
- Gwern
-
Links
- “Frequent, Infinitesimal Bottlenecks Maximize the Rate of Microbial Adaptation ”, Delaney et al 2023
- “Effective Population Size for Culturally Evolving Traits ”, Deffner et al 2021
- “Enhancing Genetic Gain through Genomic Selection: From Livestock to Plants ”, Xu et al 2020
- “Stem Cell-Derived Human Gametes: The Public Engagement Imperative ”, Adashi et al 2019
- “Fictional Science and Genre: Ectogenesis and Parthenogenesis at Mid-Century ”, Stephanson 2019
- “Non-Invasive Prenatal Sequencing for Multiple Mendelian Monogenic Disorders Using Circulating Cell-Free Fetal DNA ”, Zhang et al 2019b
- “Shades of Complexity: New Perspectives on the Evolution and Genetic Architecture of Human Skin ”, Quillen et al 2018
- “Genetic Signature of Natural Selection in First Americans ”
- “Metabolic Basis to Sherpa Altitude Adaptation ”
- “Expanded Carrier Screening in an Infertile Population: How Often Is Clinical Decision Making Affected? ”, Franasiak et al 2016
- “1338 1343..1347 ”
- “10897_2015_9833_Article 987..1000 ”
- “National Happiness and Genetic Distance: A Cautious Exploration ”
- “Signatures of Positive Selection: from Selective Sweeps at Individual Loci to Subtle Allele Frequency Changes in Polygenic Adaptation ”
- “Q~ST~-F~ST~ Comparisons: Evolutionary and Ecological Insights from Genomic Heterogeneity ”, Leinonen et al 2013
- “PAV018 1..14 ”
- “The Basic AI Drives ”, Omohundro 2008
- “DO00005427 239..272 ”
- “S00300-004-0692-3ca-Web 268..27 ”
- “4310660 192..195 ”
- “Evolutionary Models and Studies in Human Diversity ”, Meier et al 1978
- “Heritability of IQ ”
- “A Theoretical Note on Sex Linkage and Race Differences in Spatial Visualization Ability ”
- “Is Genetic Diversity Compatible With Human Equality? ”, Dobzhansky 1973
- “Genetic Studies on Hybrid Populations I. Individual Estimates of Ancestry and Their Relation to Quantitative Traits ”
- “Genetic Studies on Hybrid Populations II. Estimation of the Distribution of Ancestry ”
- “An Experimental Check on Quantitative Genetical Theory II. The Long-Term Effects of Selection ”
- “The Mean and Variability As Affected by Continuous Selection for Composition in Corn ”, Winter 1929
- “3.2 Selection against the Recessive ”
- “Potential of Gene Drives With Genome Editing to Increase Genetic Gain in Livestock Breeding Programs ”
- “Unnatural Selection: Emil Schachtzabel’s Pigeon Prachtwerk (1906) ”
- “Like a Lemon to a Lime, a Lime to a Lemon ”
- “Natural History of Ashkenazi Intelligence ”
- “The Uncertain Future of North Ronaldsay’s Seaweed-Eating Sheep ”
- “Conditions for Mathematical Equivalence of Stochastic Gradient Descent and Natural Selection ”
- “The Ride of Their Lives: Children Prepare for the World’s Most Dangerous Organized Sport ”
- “How Driscoll’s Reinvented the Strawberry ”
- “You Thought Your Cat Was Fancy? ”
- “Stamping Bar Codes on Cells to Solve Medical Mysteries ”
- “Phage-Assisted Continuous Evolution ”
- “Genetic Testing of Embryos Is Creating an Ethical Morass ”
- “Fighting for My Son With Cystic Fibrosis ”
- Wikipedia
- Miscellaneous
- Bibliography
Gwern
“History of Iterated Embryo Selection ”, Gwern 2019
Links
“Frequent, Infinitesimal Bottlenecks Maximize the Rate of Microbial Adaptation ”, Delaney et al 2023
Frequent, infinitesimal bottlenecks maximize the rate of microbial adaptation
“Effective Population Size for Culturally Evolving Traits ”, Deffner et al 2021
“Enhancing Genetic Gain through Genomic Selection: From Livestock to Plants ”, Xu et al 2020
Enhancing Genetic Gain through Genomic Selection: From Livestock to Plants
“Stem Cell-Derived Human Gametes: The Public Engagement Imperative ”, Adashi et al 2019
Stem Cell-Derived Human Gametes: The Public Engagement Imperative
“Fictional Science and Genre: Ectogenesis and Parthenogenesis at Mid-Century ”, Stephanson 2019
Fictional Science and Genre: Ectogenesis and Parthenogenesis at Mid-Century
“Non-Invasive Prenatal Sequencing for Multiple Mendelian Monogenic Disorders Using Circulating Cell-Free Fetal DNA ”, Zhang et al 2019b
“Shades of Complexity: New Perspectives on the Evolution and Genetic Architecture of Human Skin ”, Quillen et al 2018
Shades of complexity: New perspectives on the evolution and genetic architecture of human skin
“Genetic Signature of Natural Selection in First Americans ”
“Metabolic Basis to Sherpa Altitude Adaptation ”
“Expanded Carrier Screening in an Infertile Population: How Often Is Clinical Decision Making Affected? ”, Franasiak et al 2016
“1338 1343..1347 ”
“10897_2015_9833_Article 987..1000 ”
10897_2015_9833_Article 987..1000
“National Happiness and Genetic Distance: A Cautious Exploration ”
National Happiness and Genetic Distance: A Cautious Exploration
“Signatures of Positive Selection: from Selective Sweeps at Individual Loci to Subtle Allele Frequency Changes in Polygenic Adaptation ”
“Q~ST~-F~ST~ Comparisons: Evolutionary and Ecological Insights from Genomic Heterogeneity ”, Leinonen et al 2013
Q~ST~-F~ST~ comparisons: evolutionary and ecological insights from genomic heterogeneity
“PAV018 1..14 ”
“The Basic AI Drives ”, Omohundro 2008
“DO00005427 239..272 ”
“S00300-004-0692-3ca-Web 268..27 ”
s00300-004-0692-3ca-web 268..27
“4310660 192..195 ”
“Evolutionary Models and Studies in Human Diversity ”, Meier et al 1978
Evolutionary Models and Studies in Human Diversity
“Heritability of IQ ”
“A Theoretical Note on Sex Linkage and Race Differences in Spatial Visualization Ability ”
A theoretical note on sex linkage and race differences in spatial visualization ability
“Is Genetic Diversity Compatible With Human Equality? ”, Dobzhansky 1973
Is genetic diversity compatible with human equality?
“Genetic Studies on Hybrid Populations I. Individual Estimates of Ancestry and Their Relation to Quantitative Traits ”
“Genetic Studies on Hybrid Populations II. Estimation of the Distribution of Ancestry ”
Genetic studies on hybrid populations II. Estimation of the distribution of ancestry
“An Experimental Check on Quantitative Genetical Theory II. The Long-Term Effects of Selection ”
An experimental check on quantitative genetical theory II. The long-term effects of selection
“The Mean and Variability As Affected by Continuous Selection for Composition in Corn ”, Winter 1929
The mean and variability as affected by continuous selection for composition in corn
“3.2 Selection against the Recessive ”
3.2 Selection against the recessive
“Potential of Gene Drives With Genome Editing to Increase Genetic Gain in Livestock Breeding Programs ”
Potential of gene drives with genome editing to increase genetic gain in livestock breeding programs
“Unnatural Selection: Emil Schachtzabel’s Pigeon Prachtwerk (1906) ”
Unnatural Selection: Emil Schachtzabel’s Pigeon Prachtwerk (1906)
“Like a Lemon to a Lime, a Lime to a Lemon ”
“Natural History of Ashkenazi Intelligence ”
“The Uncertain Future of North Ronaldsay’s Seaweed-Eating Sheep ”
The Uncertain Future of North Ronaldsay’s Seaweed-Eating Sheep
“Conditions for Mathematical Equivalence of Stochastic Gradient Descent and Natural Selection ”
Conditions for mathematical equivalence of Stochastic Gradient Descent and Natural Selection
“The Ride of Their Lives: Children Prepare for the World’s Most Dangerous Organized Sport ”
The Ride of Their Lives: Children prepare for the world’s most dangerous organized sport
“How Driscoll’s Reinvented the Strawberry ”
“You Thought Your Cat Was Fancy? ”
“Stamping Bar Codes on Cells to Solve Medical Mysteries ”
“Phage-Assisted Continuous Evolution ”
Phage-assisted continuous evolution
“Genetic Testing of Embryos Is Creating an Ethical Morass ”
Genetic testing of embryos is creating an ethical morass
“Fighting for My Son With Cystic Fibrosis ”
Fighting for My Son With Cystic Fibrosis
Wikipedia
Miscellaneous
/doc/genetics/ selection/ 2018-choudhury.pdf : /doc/genetics/ selection/ 2018-johnson.pdf : /doc/genetics/ selection/ 2018-schlebusch.pdf : /doc/genetics/ selection/ 2018-yang.pdf : /doc/genetics/ selection/ 2018-goszczynski-figure1-iteratedembryoselection.png : /doc/genetics/ selection/ 2018-marquart-supplement-coi180032.pdf : /doc/genetics/ selection/ 2018-walsh-c26-weberfruitflyselectivebreeding.jpg : /doc/genetics/ selection/ 2017-04-19-expandingbrain-transhumangeneticenlightenment.jpg : /doc/genetics/ selection/ 2017-calhazjorge.pdf : /doc/genetics/ selection/ 2017-cohen.pdf : /doc/genetics/ selection/ 2017-hickey.pdf : /doc/genetics/ selection/ 2017-jain.pdf : /doc/genetics/ selection/ 2017-librado.pdf : /doc/genetics/ selection/ 2017-murray.pdf : /doc/genetics/ selection/ 2017-owers.pdf : /doc/genetics/ selection/ 2017-rotimi.pdf : /doc/genetics/ selection/ 2016-fan.pdf : /doc/genetics/ selection/ 2016-fuerst.pdf : /doc/genetics/ selection/ 2016-goldmann.pdf : /doc/genetics/ selection/ 2016-simonti.pdf : /doc/genetics/ selection/ 2016-domingue-usa-education-dysgenics.png : /doc/genetics/ selection/ 2015-harpending.pdf : /doc/genetics/ selection/ 2015-xinhua-tianjincloningcenter.html : /doc/genetics/ selection/ 2014-anonymous-neurocognitivedivide.pdf : /doc/genetics/ selection/ 2014-blasco.pdf : /doc/genetics/ selection/ 2014-yao.pdf : /doc/genetics/ selection/ 2013-aa.pdf : /doc/genetics/ selection/ 2013-prasolova.pdf : /doc/genetics/ selection/ 2012-choi.pdf : /doc/genetics/ selection/ 2012-hodeswertz.pdf : /doc/genetics/ selection/ 2012-apgaw-dogbreedingreport.pdf : /doc/genetics/ selection/ 2011-ciani.pdf : /doc/genetics/ selection/ 2011-cole-selectionlimits-figure5-perchromosome.jpg : /doc/genetics/ selection/ 2011-sunkara-figure2-eggembryodistribution.jpg : /doc/genetics/ selection/ 2010-evans.pdf : /doc/genetics/ selection/ 2010-stearns.pdf : /doc/genetics/ selection/ 2010-turkaspa.pdf : /doc/genetics/ selection/ 2008-scotet.pdf : /doc/genetics/ selection/ 2006-sawyer.pdf : /doc/genetics/ selection/ 2005-liao.pdf : /doc/genetics/ selection/ 2004-wykes.pdf : /doc/genetics/ selection/ 1999-trut.pdf : /doc/genetics/ selection/ 1998-haley-figure5-iteratedembryoselection.png : /doc/genetics/ selection/ 1994-charlesworth-evolutioninagestructuredpopulations.pdf : /doc/genetics/ selection/ 1992-pearson-shockleyoneugenicsandrace.pdf : /doc/genetics/ selection/ 1991-cavallisforza.pdf : /doc/genetics/ selection/ 1983-bennett-naturalselectionheredityandeugenics.pdf : /doc/genetics/ selection/ 1981-scarr-racesocialclassindividualdifferencesiq.pdf : /doc/genetics/ selection/ 1978-eaton-carnivore-1.pdf : /doc/genetics/ selection/ 1977-scarr.pdf : /doc/genetics/ selection/ 1974-jensen-2.pdf : /doc/genetics/ selection/ 1974-jensen-4.pdf : /doc/genetics/ selection/ 1973-wood.pdf : /doc/genetics/ selection/ 1973-reed.pdf : /doc/genetics/ selection/ 1973-thoday.pdf : /doc/genetics/ selection/ 1972-ohno.pdf : /doc/genetics/ selection/ 1971-wilson.pdf : /doc/genetics/ selection/ 1969-thoday.pdf : /doc/genetics/ selection/ 1967-hirsch-behaviorgeneticanalysis.pdf : /doc/genetics/ selection/ 1967-mather.pdf : /doc/genetics/ selection/ 1966-roslansky-geneticsandthefutureofman.pdf : /doc/genetics/ selection/ 1963-sheldon.pdf : /doc/genetics/ selection/ 1959-higgs.pdf : /doc/genetics/ selection/ 1958-cooper.pdf : /doc/genetics/ selection/ 1956-hirsch.pdf : /doc/genetics/ selection/ 1951-hall.pdf : /doc/genetics/ selection/ 1937-cattell-thefightforournationalintelligence.pdf : /doc/genetics/ selection/ 1935-heron.pdf : /doc/genetics/ selection/ 1933-krechevsky.pdf : /doc/genetics/ selection/ 1930-fisher-thegeneticaltheoryofnaturalselection.pdf : /doc/genetics/ selection/ 1924-tolman.pdf : /doc/genetics/ selection/ gwern-iq-selection-orderstatistics-pgs-errorregret.png : /doc/genetics/ selection/ gwern-iq-selection-chen1999approximation-error.jpg : /doc/genetics/ selection/ gwern-iq-selection-asquith2011approximation-error.jpg : /doc/genetics/ selection/ gwern-embryoselection-simulation.webm : /doc/genetics/ selection/ gwern-dysgenics-snps-exponential-realistic.jpg : /doc/genetics/ selection/ gwern-dysgenics-snps-exponential-optimal.jpg : https://pgt-p-outcome-calculator.shinyapps.io/ selectioncalc/ https://www.cell.com/ current-biology/ fulltext/ S0960-9822(22)00092-6 https://www.polygenicembryo.org/ : https://www.quantamagazine.org/ evolution-landscapes-predict-whats-next-for-covid-virus-20220111/ : https://www.quantamagazine.org/ in-test-tubes-rna-molecules-evolve-into-a-tiny-ecosystem-20220505/ :
Bibliography
https://: “Effective Population Size for Culturally Evolving Traits ”,www.biorxiv.org/ content/ 10.1101/ 2021.09.09.459561.full