Bibliography:

  1. ‘evolution’ tag

  2. ‘dysgenics’ tag

  3. ‘human evolution’ tag

  4. Are We Accidentally Building A Planetary Brain? From Superorganisms to Superintelligences, How Studying Crabs Could Reveal That We Are Unintentionally Building an Artificial World Brain

  5. The Carcinisation of Satan

  6. What did the dove sing to Pope Gregory? Ancestral melody reconstruction in Gregorian chant using Bayesian phylogenetics

  7. Programming tumor evolution with selection gene drives to proactively combat drug resistance

  8. A minimal scenario for the origin of non-equilibrium order

  9. Pervasive selective sweeps across human gut microbiomes

  10. The virial theorem and the Price equation

  11. Was Genetic Coding a Frozen Accident?

  12. A non-adaptive explanation for macroevolutionary patterns in the evolution of complex multicellularity

  13. The maintenance of genetic polymorphism in sexually antagonistic traits

  14. Lessons For Humanity From The Extinction Of The Dinosaurs

  15. Claire Jordan homepage

  16. Evolution of a minimal cell

  17. The evolution and ecology of psilocybin in nature

  18. Limits to selection on standing variation in an asexual population

  19. Cheating leads to the evolution of multipartite viruses

  20. Evolutionary constraint and innovation across hundreds of placental mammals

  21. Laplace’s demon in biology: Models of evolutionary prediction

  22. The impact of environmental factors on the evolution of brain size in carnivorans

  23. Testing Wright’s Intermediate Population Size Hypothesis—When Genetic Drift is a Good Thing

  24. A mechanism of gene evolution generating mucin function

  25. Genomic health is dependent on population demographic history

  26. Rubisco function, evolution, and engineering

  27. Modeling the genetic footprint of fluctuating balancing selection: From the local to the genomic scale

  28. Genomic evidence that a sexually selected trait captures genome-wide variation and facilitates the purging of genetic load

  29. Timesweeper: Accurately Identifying Selective Sweeps Using Population Genomic Time Series

  30. Is the Naked mole-rat a domestic animal?

  31. Phenotypic stasis with genetic divergence

  32. Genetic variance in fitness indicates rapid contemporary adaptive evolution in wild animals

  33. How full is the evolutionary fuel tank? A meta-analysis quantifies the heritable genetic variance in fitness—the fuel of evolution

  34. Identification of LINE retrotransposons and long non-coding RNAs expressed in the octopus brain

  35. Using genomics to fight extinction: Quantifying fitness of wild organisms from genomic data alone is a challenging frontier

  36. The critically endangered vaquita is not doomed to extinction by inbreeding depression

  37. Multilevel selection analysis reveals diversity in selfish mitochondrial genome dynamics

  38. Large-scale fungal strain sequencing unravels the molecular diversity in mating loci maintained by long-term balancing selection

  39. No Evidence Against the Greater Male Variability Hypothesis: A Commentary on Harrison et al 2021’s Meta-Analysis of Animal Personality

  40. The evolution of brain neuron numbers in amniotes

  41. The costs and benefits of dispersal in small populations

  42. Levantine overkill: 1.5 million years of hunting down the body size distribution

  43. A meta-analysis of sex differences in animal personality: no evidence for the greater male variability hypothesis

  44. Emergent multilevel selection in a simple spatial model of the evolution of altruism

  45. Why Did the Bee Eat the Chicken? Symbiont Gain, Loss, and Retention in the Vulture Bee Microbiome

  46. Haldane’s cost of selection imposes a mild constraint on adaptation, with a high proportion of deaths in A. thaliana being selective

  47. Coevolution of brain size and longevity in parrots

  48. The structure of genotype-phenotype maps makes fitness landscapes navigable

  49. Genetic innovations in animal-microbe symbioses

  50. Neo-darwinism still haunts evolutionary theory: A modern perspective on Charlesworth, Lande, and Slatkin 1982

  51. Nothing in evolution makes sense except in the light of parasites

  52. Million-year-old DNA sheds light on the genomic history of mammoths

  53. Kin selection explains the evolution of cooperation in the gut microbiota

  54. Survival of the Systems

  55. Darwin, sexual selection, and the brain

  56. Rapid Evolution of Plastic-degrading Enzymes Prevalent in the Global Ocean

  57. Questions About Trees

  58. Multiple origins of insular woodiness on the Canary Islands are consistent with palaeoclimatic aridification

  59. Why do human beings keep getting diseases from bats?

  60. Price’s equation made clear

  61. The evolution of evolution

  62. Invisible Designers: Brain Evolution Through the Lens of Parasite Manipulation

  63. Evolutionary implementation of Bayesian computations

  64. Social evolution of innate immunity evasion in a virus

  65. Ant collective behavior is heritable and shaped by selection

  66. From tumors to species: a SCANDAL hypothesis

  67. Spandrels and trait delimitation: No such thing as ’architectural constraint’

  68. Somatic evolution and global expansion of an ancient transmissible cancer lineage

  69. Linking a mutation to survival in wild mice

  70. Large-scale ruminant genome sequencing provides insights into their evolution and distinct traits

  71. Haploid Selection in ‘Diploid’ Organisms

  72. Contrasting genomic shifts underlie parallel phenotypic evolution in response to fishing

  73. Cryptic genetic variation accelerates evolution by opening access to diverse adaptive peaks

  74. The Bayesian Superorganism I: collective probability estimation

  75. Clonal genome evolution and rapid invasive spread of the marbled crayfish

  76. This Mutant Crayfish Clones Itself, and It’s Taking Over Europe

  77. Genebank Genomics Highlights the Diversity of a Global Barley Collection

  78. Signatures of positive selection and local adaptation to urbanization in white-footed mice (Peromyscus leucopus)

  79. Nutritional ecology and the evolution of aging

  80. Asymptotically Optimal Amplifiers for the Moran Process

  81. Amplifiers and Suppressors of Selection for the Moran Process on Undirected Graphs

  82. When local means local: Polygenic signatures of local adaptation within whitebark pine (Pinus albicaulis Engelm.) across the Lake Tahoe Basin, USA

  83. Chain Letter Evolution § Origins of Testimonials

  84. Sex as a strategy against rapidly evolving parasites

  85. Amplifiers for the Moran Process

  86. Cancer across the tree of life: cooperation and cheating in multicellularity

  87. Most Undirected Random Graphs Are Amplifiers of Selection for Birth-Death Dynamics, but Suppressors of Selection for Death-Birth Dynamics

  88. The Evolution of Sex Ratio Distorter Suppression Affects a 25 cM Genomic Region in the Butterfly Hypolimnas bolina

  89. Asymptotic expression for the fixation probability of a mutant in star graphs

  90. Brain scaling in mammalian evolution as a consequence of concerted and mosaic changes in numbers of neurons and average neuronal cell size

  91. Universality of fixation probabilities in randomly structured populations

  92. Fixation probabilities on superstars, revisited and revised

  93. Homo Moralis-Preference Evolution Under Incomplete Information and Assortative Matching

  94. Population-genomic insights into the evolutionary origin and fate of obligately asexual Daphnia pulex

  95. Recalibrating Equus evolution using the genome sequence of an early Middle Pleistocene horse

  96. Mutation Induced Extinction in Finite Populations: Lethal Mutagenesis and Lethal Isolation

  97. The Black Queen Hypothesis: Evolution of Dependencies through Adaptive Gene Loss

  98. Mitochondrial Capture by a Transmissible Cancer

  99. Darwin, Galton and the Statistical Enlightenment

  100. The Misuse of BLUP in Ecology and Evolution

  101. Information Geometry and Evolutionary Game Theory

  102. The Cat Population of Péninsule Courbet, Ȋles Kerguelen: an Example of the Founder Effect

  103. Effective population size and patterns of molecular evolution and variation

  104. An analysis of the fixation probability of a mutant on special classes of non-directed graphs

  105. Introduction history of Drosophila subobscura in the New World: a microsatellite-based survey using ABC methods

  106. Protein Stability Imposes Limits on Organism Complexity and Speed of Molecular Evolution

  107. Genome increase as a clock for the origin and evolution of life

  108. Syphilis in renaissance Europe: rapid evolution of an introduced sexually transmitted disease?

  109. Why are there four letters in the genetic alphabet?

  110. Is there really natural selection affecting the I frequencies (long hair) in the Brazilian cat populations?

  111. Darwinian adaptation, population genetics and the streetcar theory of evolution

  112. Continual change in mate preferences

  113. George Prices’s Contributions to Evolutionary Genetics

  114. The Nature of Selection

  115. The Expensive-Tissue Hypothesis: The Brain and the Digestive System in Human and Primate Evolution

  116. Short-sighted evolution and the virulence of pathogenic microorganisms

  117. Perceptual-cognitive universals as reflections of the world

  118. The Theory of Evolution

  119. Female Preference Predates the Evolution of the Sword in Swordtail Fish

  120. An extended Family with a Dominantly Inherited Speech Disorder

  121. Three Scientists and Their Gods: Looking for Meaning in an Age of Information

  122. The Measurement of Selection on Correlated Characters

  123. A Neo-Darwinian Commentary on Macroevolution

  124. Coevolution of hosts and parasites

  125. Population biology of infectious diseases: Part I

  126. Population biology of infectious diseases: Part II

  127. Stabilization in Systems: Chreods and Epigenetic Landscapes

  128. Cats and Commerce

  129. Tools for Thought

  130. A Markov process of gene frequency change in a geographically structured population

  131. Catnip: Its Raison d’Être

  132. On the Problems of Evolution and Biochemical Information Transfer

  133. Uncertainty, Evolution, and Economic Theory

  134. Explaining Human Recreational Use of ‘Pesticides’: The Neurotoxin Regulation Model of Substance Use vs. the Hijack Model and Implications for Age and Sex Differences in Drug Consumption

  135. Population Dynamics in Madoka

  136. 33ec4e73683f4b5d0397e35b2607dcdac565848e.html

  137. The Talk: a Brief Explanation of Sexual Dimorphism

  138. 43cd9cdd7200fd42ff311c74f3c5961fdc193c15.html

  139. The Infinitesimal Model: Definition, Derivation, and Implications

  140. design#future-tag-features

    [Transclude the forward-link's context]

  141. 2023-liorsdottir-table1-rosettastoneofevolutionarybiologyandnewtonianmechanics.png

  142. 2006-cobb.pdf

  143. https://math.ucr.edu/home/baez/information/

  144. https://math.ucr.edu/home/baez/information/information_geometry_8.html

  145. https://onlinelibrary.wiley.com/doi/full/10.1002/ajpa.24718

  146. https://osf.io/preprints/osf/2tvyh

  147. https://plato.stanford.edu/entries/selection-units/

  148. https://publicdomainreview.org/collection/concealing-coloration

  149. https://royalsocietypublishing.org/doi/10.1098/rspa.2013.0193

  150. https://www.cell.com/cell-genomics/fulltext/S2666-979X(24)00177-0

  151. https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5599048/

  152. https://www.quantamagazine.org/animal-mutation-rates-reveal-traits-that-speed-evolution-20230405/

  153. https://www.quantamagazine.org/cellular-self-destruction-may-be-ancient-but-why-20240306/

  154. https://www.quantamagazine.org/how-a-dna-parasite-may-have-fragmented-our-genes-20230330/

  155. https://www.quantamagazine.org/how-genes-can-leap-from-snakes-to-frogs-20221027/

  156. f68517176e0928d3228343119f341fe5ae54fd76.html

  157. https://www.quantamagazine.org/how-pools-of-genetic-diversity-affect-a-species-fate-20230425/

  158. 41d5633eaf3d87ced3a9aad80bf8e241bc0afe06.html

  159. https://www.quantamagazine.org/how-supergenes-fuel-evolution-despite-harmful-mutations-20221108/

  160. 3c6587bb3b1fa90b8ef48fee44d75855806b4f99.html

  161. https://www.sciencedirect.com/science/article/pii/S0021925823024377

  162. Programming tumor evolution with selection gene drives to proactively combat drug resistance

  163. %252Fdoc%252Fgenetics%252Fselection%252Fnatural%252F2024-leighow.pdf.html

  164. Using genomics to fight extinction: Quantifying fitness of wild organisms from genomic data alone is a challenging frontier

  165. %252Fdoc%252Fgenetics%252Fheritable%252Frare%252F2022-grueber.pdf.html

  166. No Evidence Against the Greater Male Variability Hypothesis: A Commentary on Harrison et al 2021’s Meta-Analysis of Animal Personality

  167. https%253A%252F%252Fosf.io%252Fpreprints%252Fpsyarxiv%252F6ua8r.html

  168. A meta-analysis of sex differences in animal personality: no evidence for the greater male variability hypothesis

  169. %252Fdoc%252Fpsychology%252Fpersonality%252F2021-harrison.pdf.html

  170. From tumors to species: a SCANDAL hypothesis

  171. https%253A%252F%252Fbiologydirect.biomedcentral.com%252Farticles%252F10.1186%252Fs13062-019-0233-1.html

  172. Clonal genome evolution and rapid invasive spread of the marbled crayfish

  173. https%253A%252F%252Fwww.nature.com%252Farticles%252Fs41559-018-0467-9.html

  174. This Mutant Crayfish Clones Itself, and It’s Taking Over Europe

  175. https%253A%252F%252Fwww.nytimes.com%252F2018%252F02%252F05%252Fscience%252Fmutant-crayfish-clones-europe.html.html

  176. Cancer across the tree of life: cooperation and cheating in multicellularity

  177. https%253A%252F%252Froyalsocietypublishing.org%252Fdoi%252F10.1098%252Frstb.2014.0219.html

  178. Homo Moralis-Preference Evolution Under Incomplete Information and Assortative Matching

  179. %252Fdoc%252Freinforcement-learning%252Fmulti-agent%252F2013-alger.pdf.html

  180. Population-genomic insights into the evolutionary origin and fate of obligately asexual Daphnia pulex

  181. https%253A%252F%252Fwww.pnas.org%252Fdoi%252F10.1073%252Fpnas.1313388110.html

  182. Darwin, Galton and the Statistical Enlightenment

  183. %252Fdoc%252Fstatistics%252Fbayes%252F2010-stigler-2.pdf.html

  184. Introduction history of Drosophila subobscura in the New World: a microsatellite-based survey using ABC methods

  185. %252Fdoc%252Fstatistics%252Fbayes%252F2007-pascual.pdf.html

  186. George Prices’s Contributions to Evolutionary Genetics

  187. %252Fdoc%252Fgenetics%252Fselection%252Fnatural%252F1995-frank.pdf.html

  188. Perceptual-cognitive universals as reflections of the world

  189. %252Fdoc%252Fpsychology%252Fvision%252F1994-shepard.pdf.html