Sperm Can’t Unlock an Egg Without This Ancient Molecular Key
Atomically accurate de novo design of single-domain antibodies
Self-play reinforcement learning guides protein engineering
Evolutionary-scale prediction of atomic level protein structure with a language model
OpenFold: Retraining AlphaFold2 yields new insights into its learning mechanisms and capacity for generalization
Top-down design of protein nanomaterials with reinforcement learning
Genome-wide prediction of disease variants with a deep protein language model
Accurate prediction of transition metal ion location via deep learning
Antibody optimization enabled by artificial intelligence predictions of binding affinity and naturalness
HelixFold-Single: MSA-free Protein Structure Prediction by Using Protein Language Model as an Alternative
OmegaFold: High-resolution de novo structure prediction from primary sequence
HelixFold: An Efficient Implementation of AlphaFold2 using PaddlePaddle
Robust deep learning based protein sequence design using ProteinMPNN
State-of-the-Art Estimation of Protein Model Accuracy using AlphaFold
FastFold: Reducing AlphaFold Training Time from 11 Days to 67 Hours
AlphaFold Accelerates Artificial Intelligence Powered Drug Discovery: Efficient Discovery of a Novel Cyclin-dependent Kinase 20 (CDK20) Small Molecule Inhibitor
The accuracy of protein structures in solution determined by AlphaFold and NMR
Protein Structure Predictions to Atomic Accuracy With AlphaFold
Towards a structurally resolved human protein interaction network
A structural biology community assessment of AlphaFold 2 applications
Single-sequence protein structure prediction using language models from deep learning
Can AlphaFold2 predict protein-peptide complex structures accurately?
Deep neural language modeling enables functional protein generation across families
Accurate prediction of protein structures and interactions using a 3-track network
Accurate De Novo Prediction of Protein Contact Map by Ultra-Deep Learning Model
Predicting protein structures with a multiplayer online game
Trainable, Memory-Efficient, and GPU-Friendly PyTorch Reproduction of AlphaFold 2
AlphaFold2 @ CASP14: ‘It Feels like One’s Child Has Left Home.’
CASP14: What Google DeepMind’s AlphaFold 2 Really Achieved, and What It Means for Protein Folding, Biology and Bioinformatics
AlphaFold 2 Is Here: What’s behind the Structure Prediction Miracle
This AI Software Nearly Predicted Omicron’s Tricky Structure
https://blog.google/technology/ai/google-deepmind-isomorphic-alphafold-3-ai-model/
https://blogs.sciencemag.org/pipeline/archives/2021/07/23/more-protein-folding-progress-whats-it-mean
https://ccsp.hms.harvard.edu/wp-content/uploads/2020/11/AlphaFold-at-CASP13-AlQuraishi.pdf
https://www.deepmind.com/blog/alphafold-reveals-the-structure-of-the-protein-universe
https://www.deepmind.com/blog/article/alphafold-a-solution-to-a-50-year-old-grand-challenge-in-biology
https://www.deepmind.com/research/publications/2021/protein-complex-prediction-with-alphafold-multimer
https://www.nature.com/articles/s41586-021-03819-2#deepmind
https://www.nytimes.com/2023/01/09/science/artificial-intelligence-proteins.html
https://www.quantamagazine.org/how-ai-revolutionized-protein-science-but-didnt-end-it-20240626/
https://www.quantamagazine.org/new-ai-tools-predict-how-lifes-building-blocks-assemble-20240508/
https://www.theguardian.com/science/2023/sep/21/team-behind-ai-program-alphafold-win-lasker-science-prize
https://www.wired.com/story/without-code-for-deepminds-protein-ai-this-lab-wrote-its-own/
https%253A%252F%252Fwww.biorxiv.org%252Fcontent%252F10.1101%252F2024.06.06.597716.full.html
https%253A%252F%252Fwww.biorxiv.org%252Fcontent%252F10.1101%252F2023.12.20.572662.full.html
OpenFold: Retraining AlphaFold2 yields new insights into its learning mechanisms and capacity for generalization
https%253A%252F%252Fwww.biorxiv.org%252Fcontent%252F10.1101%252F2022.11.20.517210.full.html
HelixFold-Single: MSA-free Protein Structure Prediction by Using Protein Language Model as an Alternative
https%253A%252F%252Farxiv.org%252Fabs%252F2207.13921%2523baidu.html
HelixFold: An Efficient Implementation of AlphaFold2 using PaddlePaddle
https%253A%252F%252Farxiv.org%252Fabs%252F2207.05477%2523baidu.html
FastFold: Reducing AlphaFold Training Time from 11 Days to 67 Hours
%252Fdoc%252Fai%252Fnn%252Ftransformer%252Falphafold%252F2021-humphreys.pdf.html