“A Generalizable Epigenetic Clock Captures Aging in Two Nonhuman Primates”, 2022-11-02 ():
Epigenetic clocks generated from DNA methylation array data provide important insights into biological aging, disease susceptibility, and mortality risk. However, these clocks cannot be applied to high-throughput, sequence-based datasets more commonly used to study nonhuman animals.
Here, we built a generalizable epigenetic clock using genome-wide DNA methylation data from 493 free-ranging rhesus macaques.
Using a sliding-window approach that maximizes generalizability across datasets and species, this model predicted age with high accuracy (± 1.42 years) in held-out test samples, as well as in two independent test sets: rhesus macaques from a captive population (n = 43) and wild baboons in Kenya (n = 271). Our model can also be used to generate insight into the factors hypothesized to alter epigenetic aging, including social status and exposure to traumatic events.
Our results thus provide a flexible tool for predicting age in other populations and species and illustrate how connecting behavioral data with the epigenetic clock can uncover social influences on biological age.