“The Effect of Inbreeding, Body Size and Morphology on Health in Dog Breeds”, Danika Bannasch, Thomas Famula, Jonas Donner, Heidi Anderson, Leena Honkanen, Kevin Batcher, Noa Safra, Sara Thomasy, Robert Rebhun2021-12-02 (, , ; similar)⁠:

Background: Dog breeds are known for their distinctive body shape, size, coat color, head type and behaviors, features that are relatively similar across members of a breed. Unfortunately, dog breeds are also characterized by distinct predispositions to disease. We explored the relationships between inbreeding, morphology and health using genotype based inbreeding estimates, body weight and insurance data for morbidity.

Results: A large dataset (227 breeds; dataset 1) of median heterozygosity values (H) was obtained through commercial DNA testing of 49,378 dogs…In order to investigate the effect of inbreeding level on health we used breed-based health data from Agria pet insurance…The average inbreeding based on genotype across 227 breeds was Fadj = 0.249 (95% CI 0.235–0.263).

There were statistically-significant differences in morbidity between breeds with low and high inbreeding (H = 16.49, p = 0.0004). There was also a statistically-significant difference in morbidity between brachycephalic breeds and non-brachycephalic breeds (p = 0.0048) and between functionally distinct groups of breeds (H = 14.95 p < 0.0001). Morbidity was modeled using robust regression analysis and both body weight (p < 0.0001) and inbreeding (p = 0.013) were statistically-significant (R2 = 0.77).

Smaller less inbred breeds were healthier than larger more inbred breeds.

Conclusion: In this study, body size and inbreeding along with deleterious morphologies contributed to increases in necessary health care in dogs.

…The inbreeding values within dog breeds were very high, with the mean being 0.24, just below the coefficient of inbreeding obtained from breeding full siblings. The breeds with low inbreeding included recent cross breeds (Tamaskan Dog, Barbet and Australian Labradoodle) and landrace breeds (Danish-Swedish Farmdog, Mudi and Koolie), supporting the notion that high inbreeding is a result of closed stud books or small numbers of founders or both. It also demonstrates that it is possible to have consistent breed type without inbreeding.

Similar to another recent study, brachycephalic dogs require more veterinary care than non-brachycephalic dogs.34 In addition, we identified that FCI group 2 breeds required the highest average number of veterinary care events. This group includes the larger molossoid dog breeds which others have previously identified as having higher mortality32, 44. The primitive FCI group 5 breeds had the lowest average morbidity of all the groups, which has not been reported previously, except for the Norrbottenspitz breed.45 This may be, in part, due to the large number of primitive breeds for which there is insurance data available in our data set, while other studies may not have had health data available for these breeds.

There were interesting exceptions to the correlation of inbreeding and health. The Border terrier, Basenji, Collie, and English setter breeds have high inbreeding but low morbidity. Likewise, the Malinois, Pomeranian and Russian Tsvetnaya Bolonka (Russian Toy) have lower inbreeding and high morbidity. These example breeds are neither brachycephalic nor particularly known for extreme morphologies. In the case of healthy breeds with high inbreeding, it may be possible that these breeds have been purged of deleterious alleles as has happened with inbred mouse strains [Mouse genetics concepts and applications, Silver1995]. In the opposite situation (lower inbreeding and high morbidity), the recorded morbidities could be high allele frequency Mendelian diseases or potentially conditions linked to phenotypes under selection in the breed. These discrepancies could also exist due to population differences between the insurance data and the inbreeding data.

…One must consider that the majority of dog breeds displayed high levels of inbreeding well above what would be considered safe for either humans or wild animal populations. The effects of inbreeding on overall fitness have been demonstrated experimentally using mice, where an overall reduction in fitness between mice with F = 0.25 compared to F = 0 was determined to be 57%.54 While this high level of inbreeding was less relevant to many captive and wild species, it is highly relevant to purebred dogs, based on the average inbreeding identified in this study. However the rate of inbreeding between these mouse experiments and what has occurred in dogs breeds is not the same and could have an effect on health. In humans, modest levels of inbreeding (3–6%) were shown to be associated with increased prevalence of late onset complex diseases55 as well as other types of inbreeding depression.11 These findings in other species combined with the incredibly strong breed predispositions to complex diseases like cancers and autoimmune diseases highlight the potential relevance of high inbreeding in dogs to their health.