“‘Breeding’ Tag”,2019-11-18

Bibliography for tag genetics/selection/artificial, most recent first: 2 related tags, 193 annotations, & 21 links (parent).

• See Also
• Gwern
  • “Dog Cloning For Special Forces: Breed All You Can Breed”, Gwern2018
  • “Genetics and Eugenics in Frank Herbert’s Dune-Verse”, Gwern2018
  • “Tryon’s Rat Experiment”, Gwern2020
• Links
  • “The Dream of a 3,000-Pound Pumpkin [Selective Breeding Success]”
  • “Getting Down to Business: Chain Ownership and Fertility Clinic Performance”, Forgia & Bodner2024
  • “10 Years of Behavior Genetics in the Era of Computational Genomics”, Hus2024
  • “IVF-Assisted Pregnancies Constitute 2.5% of All US Births in 2022”, Tipton & Hovey2024
  • “Genetic Gains Underpinning a Little-Known Strawberry Green Revolution”, Feldmann et al 2024
  • “Purity: Its Role in Livestock Breeding & Eugenics 1880^–₄₀1920_104ya”, Derry2023
  • “Polygenic Embryo Screening: High Approval Despite Substantial Concerns from the U.S. Public”, Furrer et al 2023
  • “The Vanishing Family: They All Have a 50-50 Chance of Inheriting a Cruel Genetic Mutation—Which Means Disappearing into Dementia in Middle Age. This Is the Story of What It’s like to Live With Those Odds”, Kolker2023
  • “Genomic Signatures of Strawberry Domestication and Breeding”, Fan & Whitaker2023
  • “Acceptance of Genetic Editing and of Whole Genome Sequencing of Human Embryos by Patients With Infertility Before and After the Onset of the COVID-19 Pandemic”, Neuhausser et al 2023
  • “Public Views on Polygenic Screening of Embryos: Understanding Moral Acceptability and Willingness to Use Is Crucial for Informing Policy [Supplementary Material]”, Meyer et al 2023
  • “Public Views on Polygenic Screening of Embryos: Understanding Moral Acceptability and Willingness to Use Is Crucial for Informing Policy”, Meyer et al 2023
  • “Scientific Refutation of ESHG Statement on Embryo Selection”, Tellier et al 2022
  • “Selecting Chromosomes for Polygenic Traits”, Zuk2022
  • “Genomic Selection Strategies to Increase Genetic Gain in Tea Breeding Programs”, Lubanga et al 2022
  • “NMR-Guided Directed Evolution”, Bhattacharya et al 2022c
  • “Genomic Prediction With Whole-Genome Sequence Data in Intensely-Selected Pig Lines”, Ros-Freixedes et al 2022
  • “The Cost of Information Acquisition by Natural Selection”, McGee et al 2022
  • “15 Years of Autologous Oocyte Thaw Outcomes from a Large University-Based Fertility Center”, Cascante et al 2022
  • “Evolutionary Models Predict Potential Mechanisms of Escape from Mutational Meltdown”, Bank et al 2022
  • “North American Beef Breeding and the Modernization of the International Cattle Breeding Industries, 1950^–₅₀2000_24ya”, Derry2022
  • “Genomic Prediction of Complex Traits in Animal Breeding With Long Breeding History, the Dairy Cattle Case”, Weller2022
  • “Genomic Selection in Aquaculture Species”, Allal & Nguyen2022
  • “Effective Mutation Rate Adaptation through Group Elite Selection”, Kumar et al 2022
  • “Assessing the Response to Genomic Selection by Simulation”, Buntaran et al 2022
  • “Effects of Periodic Bottlenecks on the Dynamics of Adaptive Evolution in Microbial Populations”, Izutsu et al 2021
  • “The Effect of Inbreeding, Body Size and Morphology on Health in Dog Breeds”, Bannasch et al 2021
  • “Continuous Cell-Free Replication and Evolution of Artificial Genomic DNA in a Compartmentalized Gene Expression System”, Okauchi & Ichihashi2021
  • “Rapid Mosaic Brain Evolution under Artificial Selection for Relative Telencephalon Size in the Guppy (Poecilia Reticulata)”, Fong et al 2021
  • “The Genetic Basis of Spatial Cognitive Variation in a Food-Caching Bird”, Branch et al 2021
  • “Correspondence between Neuroevolution and Gradient Descent”, Whitelam et al 2021
  • “Evolution of Sociability by Artificial Selection”, Scott et al 2021
  • “Clinical Outcomes and Usage from over a Decade of Planned Oocyte Cryopreservation”, Leung et al 2021
  • “Predicting Phenotypes from Genetic, Environment, Management, and Historical Data Using CNNs”, Washburn et al 2021
  • “De Novo Evolution of Macroscopic Multicellularity”, Bozdag et al 2021
  • “Two Blades of Grass: The Impact of the Green Revolution”, Gollin et al 2021
  • “Embryo Screening for Polygenic Disease Risk: Recent Advances and Ethical Considerations”, Tellier et al 2021
  • “Applications of Doubled Haploids in Plant Breeding and Applied Research”, Weyen2021
  • “Problems With Using Polygenic Scores to Select Embryos”, Turley et al 2021
  • “Surrogate Broodstock to Enhance Biotechnology Research and Applications in Aquaculture”, Jin et al 2021
  • “Genomic Characterization of World’s Longest Selection Experiment in Mouse Reveals the Complexity of Polygenic Traits”, Palma-Vera et al 2021
  • “Directed Evolution of Metarhizium Fungus Improves Its Biocontrol Efficacy against Varroa Mites in Honey Bee Colonies”, Han et al 2021
  • “A Quantitative Genomics Map of Rice Provides Genetic Insights and Guides Breeding”, Wei et al 2021
  • “Dogs’ (Canis Lupus Familiaris) Behavioral Adaptations to a Human-Dominated Niche: A Review and Novel Hypothesis”, Wynne2021
  • “Engineering Complex Communities by Directed Evolution”, Chang et al 2021
  • “No Evidence for a Relationship between Intelligence and Ejaculate Quality”, DeLecce et al 2020
  • “Controlling the Speed and Trajectory of Evolution With Counterdiabatic Driving”, Iram et al 2020
  • “In Vitro Fertilisation With Preimplantation Genetic Testing: the Need for Expanded Insurance Coverage”, Kilbride2020
  • “Theory and Method: An Analysis of European and American Animal Breeding Practices, from the 18^th to the 21^st Century”, Derry2020
  • “Preimplantation Genetic Testing for Polygenic Disease Relative Risk Reduction: Evaluation of Genomic Index Performance in 11,883 Adult Sibling Pairs”, Treff et al 2020
  • “The Value of Early-Stage Phenotyping for Wheat Breeding in the Age of Genomic Selection”, Borrenpohl et al 2020
  • “Genome-Wide Selection and Genetic Improvement during Modern Maize Breeding”, Wang et al 2020c
  • “Inbreeding and Inbreeding Depression in Linebred Beef Cattle”, Hieber2020
  • “Using High-Throughput Phenotypes to Enable Genomic Selection by Inferring Genotypes”, Whalen et al 2020
  • “Cognitive Enhancement and Network Effects: How Individual Prosperity Depends on Group Traits”, Anomaly & Jones2020
  • “Chapter 2—Genetics and Breeding of Beef Cattle”, Mateescu2020
  • “Assisted Reproductive Technology in Australia and New Zealand2018 § Pg7”, Newman2020 (page 7)
  • “Exploiting Evolutionary Steering to Induce Collateral Drug Sensitivity in Cancer”, Acar et al 2020
  • “Adaptation of SARS-CoV-2 in BALB/c Mice for Testing Vaccine Efficacy”, Gu et al 2020
  • “Utility and First Clinical Application of Screening Embryos for Polygenic Disease Risk Reduction”, Treff et al 2019
  • “Controversial DNA Screening Technique Used for at Least One Pregnancy”, Page2019
  • “Screening Human Embryos for Polygenic Traits Has Limited Utility”, Karavani et al 2019
  • “From Culinary Dud To Stud: How Dutch Plant Breeders Built Our Brussels Sprouts Boom”, Charles2019
  • “Neuroanatomical Variation among Domestic Dog Breeds”, Hecht et al 2019
  • “Tinder for Sperm: Even in the Petri Dish, Looks and Athleticism Are Prized: What Makes One Sperm Cell—A Blob of DNA With a Tail—Stand Out? The Selection Process Is like a Microscopic Mr. America Contest”, Epstein2019
  • “Assessing by Modeling the Consequences of Increased Recombination in Genomic Selection of Oryza Sativa and Brassica Rapa”, Tourrette et al 2019
  • “Activation of Toll-Like Receptor 7 & 8 Encoded by the X Chromosome Alters Sperm Motility and Provides a Novel Simple Technology for Sexing Sperm”, Umehara et al 2019
  • “Amid Animal Cruelty Debate, 80% of South Korea’s Sniffer Dogs Are Cloned”, Tribune2019
  • “Symposium Review: The Genomic Architecture of Inbreeding: How Homozygosity Affects Health and Performance”, Baes et al 2019
  • “Absolute Brain Size Predicts Dog Breed Differences in Executive Function”, Horschler et al 2019
  • “Breeding Crops to Feed 10 Billion”, Hickey et al 2019
  • “Subsidizing PGD: The Moral Case for Funding Genetic Selection”, Kemper et al 2019
  • “The Genetic Basis of Inbreeding Depression in Potato”, Zhang et al 2019
  • “Understanding Public Support for Eugenic Policies: Results from Survey Data”, Zigerell2019
  • “Screening Human Embryos for Polygenic Traits Has Limited Utility [Supplement]”
  • “Cryopreservation of Human Ovarian Tissue: A Review”, Leonel et al 2019
  • “The Sleep Inbred Panel, a Collection of Inbred Drosophila Melanogaster With Extreme Long and Short Sleep Duration”, Negron et al 2018
  • “Haploid Selection in Animals: Exploring the Fitness Consequences and Underlying Mechanisms”, Alavioon2018
  • “Construction of Arbitrarily Strong Amplifiers of Natural Selection Using Evolutionary Graph Theory”, Pavlogiannis et al 2018
  • “Unleashing Meiotic Crossovers in Crops”, Mieulet et al 2018
  • “Toward Machine-Guided Design of Proteins”, Biswas et al 2018
  • “Phenomic Selection: a Low-Cost and High-Throughput Alternative to Genomic Selection”, Rincent et al 2018
  • “1 in 38 Individuals at Risk of a Dominant Medically Actionable Disease”, Haer-Wigman et al 2018
  • “Secondary Findings from Clinical Genomic Sequencing: Prevalence, Patient Perspectives, Family History Assessment, and Health-Care Costs from a Multisite Study”, Hart et al 2018
  • “The Genetics of Fruit Flavour Preferences”, Klee & Tieman2018
  • “The Personal and Clinical Utility of Polygenic Risk Scores”, Torkamani et al 2018
  • “On the Road to Breeding 4.0: Unraveling the Good, the Bad, and the Boring of Crop Quantitative Genomics”, Wallace et al 2018
  • “Generation of Human Oogonia from Induced Pluripotent Stem Cells in Vitro”, Yamashiro et al 2018
  • “Genetics-Based Methods for Agricultural Insect Pest Management”, Alphey & Bonsall2018
  • “Microfluidic-Based Sperm Sorting & Analysis for Treatment of Male Infertility”, Samuel et al 2018
  • “Livestock 2.0—Genome Editing for Fitter, Healthier, and More Productive Farmed Animals”, Tait-Burkard et al 2018
  • “A Simple Test Identifies Selection on Complex Traits in Breeding and Experimentally-Evolved Populations”, Beissinger et al 2017
  • “Selection for Long and Short Sleep Duration in Drosophila Melanogaster Reveals the Complex Genetic Network Underlying Natural Variation in Sleep”, Harbison et al 2017
  • “We Don’t Want to Know What Will Kill Us: Years of Data on Genetic Testing Reveal That When given the Option, Most People Want Less Information, Not More”, Spinney2017
  • “Selective Sweep Analysis Using Village Dogs Highlights the Pivotal Role of the Neural Crest in Dog Domestication”, Pendleton et al 2017
  • “A Complex Multi-Locus, Multi-Allelic Genetic Architecture Underlying the Long-Term Selection-Response in the Virginia Body Weight Line of Chickens”, Zan et al 2017
  • “Demographic History, Selection and Functional Diversity of the Canine Genome”, Ostrander et al 2017
  • “Mothers Want Extraversion over Conscientiousness or Intelligence for Their Children”, Latham & Stumm2017
  • “Engineering Photosynthesis: Progress and Perspectives”, Orr et al 2017
  • “What Women Want in Their Sperm Donor: A Study of More Than 1,000 Women’s Sperm Donor Selections”, Whyte et al 2016
  • “Evaluating Methods of Updating Training Data in Long-Term Genomewide Selection”, Neyhart et al 2016
  • “Continuous Evolution of Bacillus Thuringiensis Toxins Overcomes Insect Resistance”, Badran et al 2016
  • “Prenatal Testing in Huntington Disease: After the Test, Choices Recommence”, Bouchghoul et al 2016
  • “Prenatal and Pre-Implantation Genetic Diagnosis”, Vermeesch et al 2016
  • “Evolutionary History, Selective Sweeps, and Deleterious Variation in the Dog”, Freedman et al 2016
  • “Surrogacy: Outcomes for Surrogate Mothers, Children and the Resulting Families—A Systematic Review”, Söderström-Anttila et al 2015
  • “Steering Evolution With Sequential Therapy to Prevent the Emergence of Bacterial Antibiotic Resistance”, Nichol et al 2015
  • “Technical Update: Preimplantation Genetic Diagnosis and Screening”, Dahdouh et al 2015
  • “Cost-Effectiveness Analysis of Preimplantation Genetic Screening and in Vitro Fertilization versus Expectant Management in Patients With Unexplained Recurrent Pregnancy Loss”, Murugappan et al 2015
  • “Statistical and Computational Challenges in Whole Genome Prediction and Genome-Wide Association Analyses for Plant and Animal Breeding”, Tempelman2015
  • “Chapter 10: Applications of In Vitro Techniques in Plant Breeding”, Zulkarnain et al 2015
  • “Realizing a Desired Family Size: When Should Couples Start?”, Habbema et al 2015
  • “Clinical Outcome of Preimplantation Genetic Diagnosis and Screening Using next Generation Sequencing”, Tan et al 2014
  • “One Hundred Years of Statistical Developments in Animal Breeding”, Gianola & Rosa2014
  • “Comparative Analysis of the Domestic Cat Genome Reveals Genetic Signatures Underlying Feline Biology and Domestication”, Montague et al 2014
  • “Domestication Effects on Behavioral Traits and Learning Performance: Comparing Wild Cavies to Guinea Pigs”, Brust & Guenther2014
  • “Advanced Sperm Selection Techniques for Assisted Reproduction (Review)”, McDowell et al 2014
  • “Recalibrating Equus Evolution Using the Genome Sequence of an Early Middle Pleistocene Horse”, Orlando et al 2013
  • “Quantitative Genetics in the Postmodern Family of the Donor Sibling Registry”, Lee2013b
  • “Artificial Selection on Relative Brain Size in the Guppy Reveals Costs and Benefits of Evolving a Larger Brain”, Kotrschal et al 2013
  • “Artificial Selection on Relative Brain Size in the Guppy Reveals Costs and Benefits of Evolving a Larger Brain”, Kotrschal et al 2013
  • “The Strategic Consequences of Chinese Racism: A Strategic Asymmetry for the United States”, Anonymous & Anonymous2013
  • “What Do Reproductive-Age Women Who Undergo Oocyte Cryopreservation Think about the Process As a Means to Preserve Fertility?”, Hodes-Wertz et al 2013
  • “Chapter 14. Short-Term Changes in the Mean: 2. Truncation and Threshold Selection [2013 Draft]”, Lynch & Walsh2013
  • “Motherhood, Rescheduled: The New Frontier of Egg Freezing and the Women Who Tried It”, Richards2013
  • “Selectively Bred Rat Model System for Low and High Response to Exercise Training”, Koch et al 2013
  • “Rats Bred for Low Aerobic Capacity Become Promptly Fatigued and Have Slow Metabolic Recovery After Stimulated, Maximal Muscle Contractions”, Torvinen et al 2012
  • “Fertility Awareness and Parenting Attitudes among American Male and Female Undergraduate University Students”, Peterson et al 2012
  • “Predictive Validity of a Method for Evaluating Temperament in Young Guide and Service Dogs”, Duffy & Serpell2012
  • “Brussels: a Bittersweet Story”, O’Driscoll2010
  • “A Simple Genetic Architecture Underlies Morphological Variation in Dogs”, Boyko et al 2010
  • “On Epistasis: Why It Is Unimportant in Polygenic Directional Selection”, Crow2010
  • “Population-Based Carrier Screening for Cystic Fibrosis in Victoria: The First 3 Years Experience”, Massie et al 2009
  • “Good Semen Quality and Life Expectancy: A Cohort Study of 43,277 Men”, Jensen et al 2009
  • “The Limits to Artificial Selection for Body Weight in the Mouse II. The Genetic Nature of the Limits”, Roberts2009
  • “Useful Mutants, Bred With Radiation”, Broad2007
  • “Selling Genes, Selling Gender: Egg Agencies, Sperm Banks, and the Medical Market in Genetic Material”, Almeling2007
  • “Traits and Genotypes May Predict the Successful Training of Drug Detection Dogs”, Maejima et al 2007
  • “Good Breeding: British Livestock Portraits, 1780^–₁₂₀1900_124ya”, Schinto2006
  • “Population Size and Long-Term Selection”, Weber2004
  • “Utilization of Genomic Information in Livestock Improvement”, Elsen2003
  • “A Mother Searches for ‘Donor White’”
  • “Preimplantation Genetic Diagnosis in Cattle: A Review”, Bodó et al 2001
  • “Genetics of Quantitative Traits and Improvement of Dog Breeds”, Famula2001
  • “John R. Laughnan: Over 40 Years of Contributions to Genetic Concepts: Genetics from A to Zea in 3 Score and Ten”, Coe et al 1999
  • “Experimental Evolution of Parasites”, Ebert1998
  • “Influence of Five Years of Antenatal Screening on the Paediatric Cystic Fibrosis Population in One Region”, Cunningham & Marshall1998
  • “Cloning, Inbreeding, and History”, Orel1997
  • “The Use of a Behavior Test for the Selection of Dogs for Service and Breeding, I: Method of Testing and Evaluating Test Results in the Adult Dog, Demands on Different Kinds of Service Dogs, Sex and Breed Differences”, Wilsson & Sundgren1997
  • “Large Genetic Change at Small Fatness Cost in Large Populations of Drosophila Melanogaster Selected for Wind Tunnel Flight: Rethinking Fitness Surfaces”, Weber1996
  • “Seeing The Forest From The Trees: When Predicting The Behavior Or Status Of Groups, Correlate Means”, Lubinski & Humphreys1996b
  • “Robert Bakewell and the Longhorn Breed of Cattle”, Stanley1995
  • “Impact of Biotechnology on Animal Breeding”, Wilmut et al 1992
  • “Tolman and Tryon: Early Research on the Inheritance of the Ability to Learn”, Innis1992
  • “Inheritance of Migratory Direction in a Bird Species: a Cross-Breeding Experiment With SE-Migrating and SW-Migrating Blackcaps (Sylvia Atricapilla)”, Helbig1991
  • “Increased Selection Response in Larger Populations. II. Selection for Ethanol Vapor Resistance in Drosophila Melanogaster at Two Population Sizes”, Weber & Diggins1990
  • “Long-Term Selection for a Quantitative Character in Large Replicate Populations of Drosophila Melanogaster: Part 4: Relaxed and Reverse Selection”, Yoo et al 1980d
  • “Long-Term Selection for a Quantitative Character in Large Replicate Populations of Drosophila Melanogaster: II. Lethals and Visible Mutants With Large Effects”, Yoo1980b
  • “Long-Term Selection for a Quantitative Character in Large Replicate Populations of Drosophila Melanogaster: Part 3: The Nature of Residual Genetic Variability”, Yoo1980c
  • “Long-Term Selection for a Quantitative Character in Large Replicate Populations of Drosophila Melanogaster. V. The Inbreeding Effect of Selection”, Yoo1980e
  • “Long-Term Selection for a Quantitative Character in Large Replicate Populations of Drosophila Melanogaster: 1. Response to Selection”, Yoo1980
  • Experimenter Effects in Behavioral Research: Enlarged Edition, Rosenthal1976
  • “Seventy Generations of Selection for Oil and Protein in Maize”, Dudley1974
  • “History of Sabin Attenuated Poliovirus Oral Live Vaccine Strains”, Sabin & Boulger1973
  • “On Evolution”, Smith1972
  • “Genetic Experiments With Animal Learning: A Critical Review”
  • “Behavioral Genetics [Annual Review]”, McClearn1970
  • Genetics and the Social Behavior of the Dog [Dog Behavior: The Genetic Basis], Scott & Fuller1965
  • “The Absolute Weapon: A Hypothetical Positive Eugenics Program As Used in Biological Warfare”, McConnell1961
  • “A Theory of Limits in Artificial Selection”, Robertson1960
  • “Some Agricultural History Salvaged”, Pawson1959
  • “Robert Bakewell: Pioneer Livestock Breeder”, Pawson1957
  • “The Inheritance of Brightness and Dullness in Maze Learning Ability in the Rat”, Heron1941
  • “Genetic Differences in Maze-Learning Ability in Rats (XIII)”, Tryon1940c
  • “Experimental Epidemiology”, editors 1936
  • Experimental Epidemiology, Greenwood et al 1936
  • “The Association Between Brain Size and Maze Ability in the White Rat”, Hamilton1935
  • “Number of Mendelian Factors in Quantitative Inheritance”, Fisher1933
  • “Evolution By Selection: The Implications of Winter’s Selection Experiment”, Gosset1933
  • “The Reliability of Rat Learning Scores from the Multiple-T Maze As Determined by Four Different Methods”, Stone & Nyswander1927
  • “The Result of Selecting Fluctuating Variations: Data from the Illinois Corn Breeding Experiments”, Surface 1911
  • “Robert Bakewell [Biography]”, Housman1894
  • “London Labour and the London Poor; a Cyclopaedia of the Condition and Earnings of Those That Will Work, Those That Cannot Work, and Those That Will Not Work V3 § Jack Black”, Mayhew1851
  • “Robert Bakewell [Obituary]”, Lawrence1805
  • “Meiosis Is All You Need”
  • “Two Concrete Ways to Help Feeder Rodents § Injury & Disease”
  • “Why I Donate My Sperm over Facebook and Have Fathered 23 Children: Anthony Fletcher Says He Enjoys Helping Women Conceive Who May Not Be Able to Afford a Donor”
  • “The Mouse As a Microscope”
  • “Parenting: This Is Illegal in Most of the World. In America, New Parents Are Embracing It.”
  • “Steve Hsu Homepage (Information Processing)”, Hsu2024
  • “Hybridization in Citrus Cultivars: Genetic Mixing of 3 Ancestral Species [Ternary Plot]”, Wikipedia2024
  • “Age of the Bacteriophage”
  • “IVF Accounts for 5% of Babies Born in Japan in 2015: Survey”
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    • sperm-selection genetic-breeding selective-breeding fertility-implications reproductive-genetics breeding-strategies
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  • Wikipedia
• Miscellaneous
• Bibliography